ViewWiki

Lesson 4 of 4

Enzymes.

About 25 minutes · 7 practice questions

How an enzyme speeds up a reaction without changing, why it works on one substrate only, and what heat, cold and pH do to it.

Step 1 of 7 · Shape and site

Step 1 of 7

Shape and site

Nearly every chemical reaction in a cell, from splitting sugar to copying DNA, is sped up by an enzyme: a protein that acts as a catalyst. Without enzymes, most of those reactions would take years at body temperature.

In the beaker in the Scene three enzymes swim in water among molecules of a double sugar. Each enzyme has a pocket, the active site, whose shape matches the sugar molecule, the substrate, exactly. A substrate that enters the active site binds, splits into two simple sugars, and they leave.

To the question

Step 2 of 7

A lower barrier

For a reaction to happen, molecules must collide with enough energy to break bonds: that is the activation energy. The second chart is the reaction’s energy profile, with an enzyme and without.

To the question

Step 3 of 7

Again and again

Follow one enzyme for a few seconds. How many molecules does it split?

To the question

Step 4 of 7

Too hot

Two effects of temperature pull opposite ways. On one side, the hotter it is, the faster the molecules move, and the more collisions carry enough energy. On the other, the enzyme is a protein, and in heat its fold unravels, as you saw in the last Lesson.

To the question

Step 5 of 7

Too cold

In the Fridge collisions carry very little energy. But what happens to the fold?

To the question

Step 6 of 7

Too acidic

pH, how acidic the water is, changes how the enzyme works too. The substrate holds on in the active site not only by its shape but also by the electric charges of the side chains there.

To the question

Step 7 of 7

Lock and key

Now Temperature and pH are both free. Move each one and watch the activity curve. Every enzyme has an optimum temperature and an optimum pH, and every enzyme has its own substrate.

To the question

Still of the Enzymes 3D scene
Interactive scene

Loading the interactive version…

Each step sets up the Scene for you, and a control marked “fixed” stays put for that step.

To the experiment

Practice · Choose

An enzyme that has denatured stops working. Why?

To the experiment

Practice · Choose

How does an enzyme speed up a reaction?

To the experiment

Practice · Choose

What happens to an enzyme after it has split one sugar molecule?

To the experiment

Practice · Predict, then look

The enzymes are working at body temperature. We will move them to a Hot bath, 50 °C. What will happen to the rate at which they split sugar?

To the experiment

Practice · Predict, then look

Now we move them to the Fridge, 4 °C. What will happen?

To the experiment

Practice · Predict, then look

These enzymes work best at pH 7, neutral. We will lower pH to 3, as acidic as lemon juice. What will happen?

To the experiment

Practice · Choose

The enzyme in the Scene splits a double sugar into two simple sugars. If we add starch and protein to the beaker, what will it do with them?